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Publications from the Callis Lab
Stone, S.L., Williams, L.A., Farmer, L.M., Vierstra, R.D., and Callis, J.
KEEP ON GOING, a RING E3 Ligase Essential for Arabidopsis Growth and Development, Is Involved in Abscisic Acid Signaling.
The Plant Cell 2006 18: 3415-3428. [Full Text] [Supplemental Data]
Dreher, K.A., Brown, J., Saw, R.E., and Callis, J.
The Arabidopsis Aux/IAA Protein Family Has Diversified in Degradation and Auxin Responsiveness.
The Plant Cell 2006 18: 699-714. [Full Text] [Supplemental Data]
Callis, J, and Ling, R.
Preparation, Characterization, and Use of Tagged Ubiquitins.
Methods in Enzymology 2005 399:51-64.
[Full Text]
Kraft, E, Stone, SL, Ma, L, Su,N, Gao,Y, Lau, O-S, Deng,X-W, and Callis, J.
Genome Analysis and Functional Characterization of the E2 and RING-Type E3 Ligase Ubiquitination Enzymes of Arabidopsis
Plant Physiolgy 2005 139: 1597-1611.
[Full Text] [Supplemental Data]
Callis, J .
Plant biology: Auxin action
Nature 2005 May 26; 435:436-437.
[Full Text]
Figueroa, P., Gusmaroli, G., Serino, G., Habashi, J., Ma, L., Shen, Y., Feng, S., Bostick, M., Callis, J., Hellmann, H., and Deng, X.W.
Arabidopsis Has Two Redundant Cullin3 Proteins That Are Essential for Embryo Development and That Interact with RBX1 and BTB Proteins to Form Multisubunit E3 Ubiquitin Ligase Complexes in Vivo.
Plant Cell 2005 Apr;17(4):1180-95.
[Full Text]
Stone SL, Hauksdottir H, Troy A, Herschleb J, Kraft E, Callis J.
Functional Analysis of the RING-Type Ubiquitin Ligase Family of Arabidopsis.
Plant Physiology 2005 137(1):13-30 [Full Text] [Supplemental Data]
Bostick M, Lochhead SR, Honda A, Palmer S, Callis J.
Related to Ubiquitin 1 and 2 Are Redundant and Essential and Regulate Vegetative Growth, Auxin Signaling, and Ethylene Production in Arabidopsis.
Plant Cell 2004 16:2418-2432 [Full Text]

*Laplaza, J.M., *Bostick, M., Scholes, D.T., Curcio, M.J., and Callis, J.
Saccharomyces cerevisiae ubiquitin-like protein Rub1p conjugates to cullin family members Rtt101p and Cul3p in vivo.
Biochemical Journal 2004 377:459-467. [Full Text]

*First two authors contributed equally to publication

Zenser, N., Dreher, K., Edwards, S.E., and Callis, J.
Acceleration of Aux/IAA proteolysis is specific for auxin and independent of AXR1.
The Plant Journal 2003 35(3): 284-295. [Full Text]
Linghu, B., Callis, J., and Goebl, M.G.
Rub1p processing by Yuh1p is required for wild-type levels of Rub1p conjugation to Cdc53p.
Eukaryotic Cell 2002 1(3): 491-494. [Full Text]
Yoshida, S., Ito, M., Callis, J., Nishida, I., and Watanabe, A.
A delayed leaf senescence mutant is defective in arginyl-tRNA:protein arginyltransferase, a component of the N-end rule pathway in Arabidopsis.
Plant Journal 2002 32(1): 129-137. [Full Text]

*Ramos, J. A., *Zenser, N., Leyser, O., and Callis, J.
Rapid Degradation of Auxin/Indoleacetic Acid Proteins Requires Conserved Amino Acids of Domain II and Is Proteasome Dependent
Plant Cell 2001 13: 2349-2360. [Full Text]
*First two authors contributed equally to publication

Zenser, N., Ellsmore, A., Leasure, C., and Callis, J.
Auxin modulates the degradation rate of Aux/IAA proteins
PNAS 2001 98: 11795-11800. [Full Text]
Schwechheimer, C., Serino, G., Callis, J., Crosby, W.L., Estelle, M., Lyapina, S., Deshaies, R.J., and Deng, X.-W.
The COP9 signalosome interacts with the E3 ubiquitin ligase SCF-TIR1 and mediates auxin-response in Arabidopsis.
Science 2001 292: 1379-1382. [Full Text]
McClinton, R. S.; Chandler, J. S.; Callis, J.
cDNA isolation, characterization, and protein intracellular localization of a katanin-like p60 subunit from Arabidopsis thaliana.
Protoplasma 2001. 216 (3-4): 181-190
Callis, J; Vierstra, RD.
Protein degradation in signaling.
Current Opinion in Plant Biology 2000 3: 381-6. [Full Text]
Rao-Naik, C; Chandler, JS; McArdle, B; Callis, J.
Ubiquitin-specific proteases from Arabidopsis thaliana: cloning of AtUBP5 and analysis of substrate specificity of AtUBP3, AtUBP4, and AtUBP5 using Escherichia coli in vivo and in vitro assays.
Archives of Biochemistry and Biophysics 2000 379: 198-208. [Full Text]
Ling, R; Colón, E; Dahmus, ME; Callis, J.
Histidine-tagged ubiquitin substitutes for wild-type ubiquitin in Saccharomyces cerevisiae and facilitates isolation and identification of in vivo substrates of the ubiquitin pathway.
Analytical Biochemistry 2000 282: 54-64. [Full Text]
Worley, CK; Zenser, N; Ramos, J; Rouse, D; Leyser, O; Theologis, A; Callis, J.
Degradation of Aux/IAA proteins is essential for normal auxin signalling.
Plant Journal 2000 21: 553-62. [Full Text]
Vierstra, RD; Callis, J.
Polypeptide tags, ubiquitous modifiers for plant protein regulation.
Plant Molecular Biology 1999 41: 435-42. [Full Text]
Rao-Naik, C; Delacruz, W; Laplaza, JM; Tan, S; Callis, J; Fisher, AJ.
The Rub family of ubiquitin-like proteins: Crystal structure of arabidopsis Rub1 and expression of multiple Rubs in Arabidopsis.
Journal of Biological Chemistry 1998 273: 34976-34982. [Full Text]
del Pozo, JC; Timpte, C; Tan, S; Callis, J; Estelle, M.
The ubiquitin-related protein RUB1 and auxin response in Arabidopsis.
Science 1998 280: 1760-1763. [Full Text]
Worley, CK; Ling, R; Callis, J.
Engineering in vivo instability of firefly luciferase and Escherichia coli beta-glucuronidase in higher plants using recognition elements from the ubiquitin pathway.
Plant Molecular Biology 1998 37: 337-347. [Full Text]
Lammer, D; Mathias, N; Laplaza, JM; Jiang, W; Liu, Y; Callis, J; Goebl, M; Estelle, M.
Modification of yeast Cdc53p by the ubiquitin-related protein Rub1p affects function of the SCFCdc4 complex.
Genes & Development 1998 12: 914-926. [Full Text]
 

 

Judy Callis
University of California, Davis
Section of Molecular and Cellular Biology
One Shields Avenue
Davis, CA 95616
office: 103A Briggs Hall (530-752-1015)
lab: 103 Briggs Hall (530-752-1014)
departmental fax (530-752-3085)
jcallis@ucdavis.edu

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