Protein secretion/trafficking
Compartmentalization

Cells use membranes to isolate and concentrate specific biochemical reactions inside the cell. A classic example of such compartmentalization occurs in the secretory pathway where specific carbohydrate modifcations of proteins are restricted to subcellular membrane organelles (e.g., endoplasmic reticulum or the golgi).

Such compartmentalization requires the movement, or trafficking, of proteins with a high degree of specificity. The secretory pathway is able to recognize only those proteins destined for secretion or membrane organelle residence and target those proteins to their final destination using a combination of protein translocation (movement of proteins across the lipid bilayer) and vesicular transport.

Polarized Secretion

Two examples help us understand why proper targeting of proteins is so critical. Epithelial cells in the gut use the Na/Glucose symporter to move glucose against its concentration gradient. This process has to occur on the cell surface facing the lumen of the gut (the apical surface of the cell), thus the Na/Glucose symporter must be secreted in a polarized fashion to the apical surface of the plasma membrane.

Migrating cells, such as those we observed after wound healing, form polarized cell adhesions (sticky stuff) at their leading edge. In the movie below, GFP has been fused to a integral membrane protein that allows cells to stick to the coverslip. Through changes in the cell's cytoskeletal contractile forces mediate the movement of the cell in the direction of the open wound.
Protein Translocation
Proteins enter the secretory pathway via the process of translocation. Unfolded proteins are threaded through a gated type channel in the endoplasmic reticiculum (ER) known as the translocon (Sec61 complex). Protein translocation occurs in discreted steps and is robust. As observed in the trafficking of a viral protein fused to GFP in the movie below, proteins move from the ER in vesicles, populate the golgi and then are moved via vesicles to the plasma membrane.
Hirschberg et. al., 1998. ts045VSVG-GFP. After shift to 32oC, the VSV-GFP is observed to traffick from the ER to the golgi and the golgi to the plasma membrane.
Translocation of proteins into the ER is maintained through G-proteins that act both as "switches" and "timers" to ensure the proper order of steps and the recycling of complexes. In this way, the secretory system is kept from being saturated by an excess of secreted proteins.
Vesicular Transport
Once proteins have entered the secretory pathway through translocation, it must be properly targeted to its final cellular destination (i.e., plasma membrane, lysosome, secretory vesicle, etc.). At the same time, membrane organelles must maintain their "identity" by retaining their resident proteins (e.g., BiP must stay in the ER). Secretory protein targeting is carried out by the process of vescicular transport. Trafficking of proteins out of the ER is termed anterograde transport and the return of proteins from the golgi to the ER is termed retrograde transport. Vesicular transport consists of budding, docking and fusion steps.
FRAP: Fluorescence Recovery After Photobleaching of this lipid anchored GFP protein allows the observation of discrete vesicular transport events.
Nicholes et. al., 2001 JCB. COS cells expressing GPI-GFP.
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